data.phylip.pony {phyclust} | R Documentation |
Great pony 524 EIAV dataset is published by Baccam, P., et al. (2003),
and they are also available on NCBI database.
There is a follow-up study, Data Pony 625
.
A text file in phylip format is stored in the data subdirectory.
EIAV rev dataset contains 146 nucleotide sequences and 405 sites.
Belshan, M., et al. (2001).
Phylogenetic Clustering Website: http://snoweye.github.io/phyclust/
Belshan, M., et al. (2001) “Genetic and Biological Variation in Equine Infectious Anemia Virus Rev Correlates with Variable Stages of Clinical Disease in an Experimentally Infected Pony”, Virology, 279, 185-200.
## Not run: library(phyclust, quiet = TRUE) data.path <- paste(.libPaths()[1], "/phyclust/data/pony524.phy", sep = "") # edit(file = data.path) my.pony.524 <- read.phylip(data.path) str(my.pony.524) ## End(Not run)